How to Use Mendeley for Reference Management: A Step-by-Step Guide

Managing references is one of the most time-consuming parts of academic writing. For students working on thesis proposals, the challenge of organizing dozens—or even hundreds—of citations while maintaining correct APA 7th edition formatting can feel overwhelming. This is where Mendeley becomes a game-changer.

Mendeley is a free reference management tool that helps you collect, organize, cite, and share research. It saves time, prevents formatting errors, and is recommended by university libraries worldwide . Whether you’re an undergraduate or a PhD candidate, Mendeley can transform your referencing workflow.

At Proposal Writers Kenya, we help students navigate the complexities of thesis writing—including proper citation and formatting. Let’s explore how Mendeley can make your academic life easier.

How online thesis writing service work

What Is Mendeley and Why Should You Use It?

Mendeley is a reference manager that works as both a desktop application and a web-based tool . Its key features include:

  • Store and organize PDFs and reference materials in one place

  • Automatically extract citation details (author, title, journal, year) from imported PDFs

  • Insert in-text citations while writing in Microsoft Word using the Mendeley Cite plugin 

  • Generate bibliographies in over 8,000 citation styles, including APA 7th, MLA, Chicago, and Harvard 

  • Sync your library across devices—desktop, web, and mobile 

  • Collaborate with others through private groups

With a free Mendeley account, you get 2GB of personal storage and 100MB of shared storage, which is sufficient for most students’ needs

Thesis Proposal Writers in Kenya

Step 1: Create Your Mendeley Account

Start by visiting www.mendeley.com and signing up for a free account.

Important advice for Kenyan university students: Use a personal email address rather than your university email. Some institutions have login issues with their email systems, and using a personal email ensures you’ll retain access even after graduation 

Thesis Proposal Writers in Kenya

Step 2: Download and Install Mendeley Tools

You need three essential components :

  1. Mendeley Reference Manager – The desktop app where your library lives. Download it from the official Mendeley website .

  2. Mendeley Web Importer – A browser extension for Chrome, Edge, or Firefox that lets you save references directly from academic databases with one click .

  3. Mendeley Cite – The Microsoft Word add-in that connects Word to your Mendeley library. You can find it by going to the Insert tab in Word, clicking Get Add-ins (or “Store”), and searching for “Mendeley Cite”

Step 3: Build Your Reference Library

There are several ways to add references to your Mendeley library :

Method A: Drag and Drop PDFs

Simply drag PDF files from your computer directly into the Mendeley Reference Manager. The software will automatically extract metadata like author, title, journal, and DOI. This is the fastest method .

Method B: Use Mendeley Web Importer

While browsing Google Scholar, PubMed, or other academic databases, click the Web Importer icon. Mendeley will detect references on the page and let you add them with PDFs attached .

Method C: Manual Entry with DOI Lookup

If you have the DOI (Digital Object Identifier) of an article:

  1. Click + Add New → Add Entry Manually 

  2. Paste the DOI and click the search icon—Mendeley will auto-fill the metadata 

Critical: Verify Your Metadata

Mendeley is not perfect. After adding a reference, always check the details pane. Common issues to fix manually :

  • Title Capitalization: APA 7th requires article titles in sentence case (only capitalize the first word and proper nouns). Mendeley often imports in title case.

  • Missing DOIs: Ensure the DOI is present if the source has one.

Step 4: Organize Your Library

Use folders (called collections) to organize references by thesis chapter or research topic. You can also add tags and notes to make searching easier 

Thesis Proposal Literature Review

Step 5: Read, Highlight, and Annotate PDFs

Mendeley allows you to read and annotate PDFs directly within the app. You can :

  • Highlight text in different colors

  • Add sticky notes to PDFs

  • Work on multiple PDFs at once using tabs

All annotations are stored with your references and sync across devices.

Writing a Research Proposal Methodology

Step 6: Install and Use Mendeley Cite in Word

Once Mendeley Cite is installed, open your Word document and click the Mendeley Cite button under the References tab .

Selecting APA 7th Style

Before inserting citations:

  1. In the Mendeley Cite panel, click Citation Settings

  2. Click Change citation style

  3. Search and select American Psychological Association 7th edition 

Inserting In-Text Citations

  1. Place your cursor where you want the citation

  2. In the Mendeley Cite search bar, type the author’s name

  3. Tick the box next to the correct reference

  4. Click Insert citation 

For direct quotes, you can add page numbers by clicking the reference preview and entering the page number in the “Page” field .

Generating the Bibliography

When you finish writing:

  1. Place your cursor on a new page titled References

  2. In the Mendeley Cite panel, click the More menu (three dots)

  3. Select Insert Bibliography

Mendeley will generate a complete, alphabetized reference list formatted to APA 7th standards

Common Mistakes to Avoid

MistakeWhy It Matters
Not checking auto-imported metadataResults in inaccurate citations, such as incorrect title capitalization
Forgetting to select APA 7thDifferent styles have different rules—always verify your citation style
Not organizing papers into foldersMakes literature review chaotic as your library grows
Editing citations directly in WordManual edits are lost when references are refreshed

Conclusion

Mendeley is an invaluable tool for any student working on a thesis proposal. It saves time, reduces errors, and ensures your citations and bibliography are formatted correctly every time. However, remember that Mendeley is a tool to assist you—it’s not infallible. Always verify your citations against the APA 7th Publication Manual .

Still feeling overwhelmed by the demands of thesis writing? At Proposal Writers Kenya, we offer expert support with proposal writing, data analysis, editing, and formatting. Let us help you submit a proposal that impresses your supervisors—contact us today for a free quote.

Need Help With Your Research Proposal?